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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7937414_7939720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7937414 - 7939720

Intron Length:

2307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TATGCCTGAAGT

Flanking Amino Acid:

SCSRYAPTSKRRARRQDVKY

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

100

1.24

0.5

100

Major PPT

70.7

0.47

0.8

65.1

30.8

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

59.2

0.37

1.9

78.11

43.8

Associated Gene:

Gene:

SEMA3D

Ensembl Gene ID:

ENSAPLG00000010446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026447

7851439 - 7952258

100820

ENSAPLT00000010992

7837968 - 7952258

114291