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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7939786_7941609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7939786 - 7941609

Intron Length:

1824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

GTTTGCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

ATCTCCTGTACC

Flanking Amino Acid:

PVAQCWDVEDSISHETADEK

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

32.8

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

82.6

0.73

0.9

73.4

41.9

Minor 5ss

38.4

-1.3

41.2

Minor BPS

58.7

0.25

1.8

69.96

41.2

Associated Gene:

Gene:

SEMA3D

Ensembl Gene ID:

ENSAPLG00000010446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026447

7851439 - 7952258

100820

ENSAPLT00000010992

7837968 - 7952258

114291