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Intron Name: Anas_platyrhynchos_platyrhynchos_1_7941750_7951844_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7941750 - 7951844

Intron Length:

10095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTAACCATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

ACATTCACAATT

Flanking Amino Acid:

QRSGEEHREELKADERIIKT

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

77.7

0.69

83.3

27.7

Major PPT

69.9

0.45

62.9

38.2

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

48.1

-0

1.8

64.1

40.4

Associated Gene:

Gene:

SEMA3D

Ensembl Gene ID:

ENSAPLG00000010446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026447

7851439 - 7952258

100820

ENSAPLT00000010992

7837968 - 7952258

114291