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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79427500_79427900_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
79427500 - 79427900

Intron Length:
401

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGCATT

5'SS Class:
strong_major

3'SS Sequence:
AAGCTTGTTTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTAAT

U12 Branch Point Sequence:
GTTTGTGTATTT

Flanking Amino Acid:
LMRDLDQRTEDLKSEIDKLA

Intron Amino Acid Position:
150

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.9
0.92
0.8
86.9
30.1

Major BPS
79.3
0.73
1.1
77.9
34.9

Major PPT
70.1
0.45
1
65.9
44.5

Minor 5ss
39.9
-1.1
3.1
56.9
47.4

Minor BPS
43.7
-0.4
2.4
67.71
44.1

Associated Gene:

Gene:
ING4

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

79425282 - 79434729
9448