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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79427973_79434353_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
79427973 - 79434353

Intron Length:
6381

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAGCGGC

5'SS Class:
major

3'SS Sequence:
CCTTCCCCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGTTGAA

U12 Branch Point Sequence:
TTGAACCTGACT

Flanking Amino Acid:
AGMYLEHYLDSIENLPFELQ

Intron Amino Acid Position:
126

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68
0.43
1.1
55.6
42.5

Major BPS
59.7
0.24
1.2
52.7
43.2

Major PPT
79.9
0.67
0.7
73.4
24.9

Minor 5ss
38.9
-1.3
3.4
55.5
43.2

Minor BPS
50
0.08
1.9
74.15
42.3

Associated Gene:

Gene:
ING4

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

79425282 - 79434729
9448