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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79494682_79497773_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79494682 - 79497773

Intron Length:

3092

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

GAG|GTAATTTCC

5'SS Class:

strong_major

3'SS Sequence:

ACCCATTCCTTTG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

TTAACCCCAAAA

Flanking Amino Acid:

GSHCRGREMRRPRDEAEPRG

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

77.7

31.1

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

38.2

-0.6

3.1

54.1

35.6

Minor 5ss

41.5

-0.9

2.7

54.2

42.9

Minor BPS

47.6

-0.1

64.26

40.9

Associated Gene:

Gene:

COPS7A

Ensembl Gene ID:

ENSAPLG00000001230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018113

79493822 - 79500295

6474