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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79498321_79498564_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79498321 - 79498564

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCCCT

5'SS Class:

major

3'SS Sequence:

TCCCTTTGGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAAATTCTAATA

Flanking Amino Acid:

FAYGTYADYLAEAANLPPLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

62.3

43.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.4

0.44

67.1

38.1

Minor 5ss

34.6

-1.7

3.1

40.8

Minor BPS

48.7

-0.1

1.6

58.45

34.8

Associated Gene:

Gene:

COPS7A

Ensembl Gene ID:

ENSAPLG00000001230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018113

79493822 - 79500295

6474

ENSAPLT00000001325

79497980 - 79500295

2316