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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79498654_79498729_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79498654 - 79498729

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCCC

5'SS Class:

major

3'SS Sequence:

CGTCTTCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTTAG

U12 Branch Point Sequence:

CTCGTGCTAGGT

Flanking Amino Acid:

SVVTLAAKIKCIPYSVLLEQ

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

63.3

41.2

Major BPS

39.9

-0.6

1.7

28.8

44.9

Major PPT

0.56

0.8

69.2

31.4

Minor 5ss

32.1

-2

3.2

43.2

43.9

Minor BPS

32.5

-1.2

2.4

46.85

45.8

Associated Gene:

Gene:

COPS7A

Ensembl Gene ID:

ENSAPLG00000001230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018113

79493822 - 79500295

6474

ENSAPLT00000001325

79497980 - 79500295

2316