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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79499507_79499762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79499507 - 79499762

Intron Length:

256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TCTTGCTTTATT

Flanking Amino Acid:

LALKQQIESEVANLKKTIKV

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

80.5

0.69

0.9

77.4

41.2

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

58.9

0.36

2.1

79.54

Associated Gene:

Gene:

COPS7A

Ensembl Gene ID:

ENSAPLG00000001230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018113

79493822 - 79500295

6474

ENSAPLT00000001325

79497980 - 79500295

2316