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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79499915_79500229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79499915 - 79500229

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGAGT

5'SS Class:

major

3'SS Sequence:

CCTCTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTCGGTTTGATT

Flanking Amino Acid:

QASKKTSKAKGLRGSAKIWS

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

69.5

42.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

77.5

0.62

0.7

71.6

26.5

Minor 5ss

28.1

-2.5

3.1

31.3

42.6

Minor BPS

49.7

0.06

1.9

69.71

42.6

Associated Gene:

Gene:

COPS7A

Ensembl Gene ID:

ENSAPLG00000001230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018113

79493822 - 79500295

6474

ENSAPLT00000001325

79497980 - 79500295

2316