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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79520172_79520696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79520172 - 79520696

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGATGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTCTTTGTGATG

Flanking Amino Acid:

MQKNDLQRRKRMKWIQRDRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

67.4

0.39

1.1

43.5

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

44.4

-0.5

48.2

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048393

79519015 - 79520952

1938

ENSAPLT00000000824

79519864 - 79521657

1794