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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79565849_79566490_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79565849 - 79566490

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTACCGCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

GTCTCCTTTATT

Flanking Amino Acid:

YDTLTGVPILVVSFFSLRYD

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.8

42.2

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

54.6

0.1

1.1

52.2

36.8

Minor 5ss

39.9

-1.1

2.9

41.5

Minor BPS

68.8

0.67

1.6

80.73

41.1

Associated Gene:

Gene:

GPR162

Ensembl Gene ID:

ENSAPLG00000028368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045489

79564113 - 79568136

4024