Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_79573571_79573693_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79573571 - 79573693

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

GTCCTCTGCATT

Flanking Amino Acid:

ECKDLLRLTKAAAGTGDGYR

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

73.1

0.57

71.9

31.3

Major PPT

78.6

0.64

0.9

69.8

41.5

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

45.9

-0.2

1.8

62.39

Associated Gene:

Gene:

P3H3

Ensembl Gene ID:

ENSAPLG00000002993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003050

79568234 - 79578476

10243