Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_79586371_79587357_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79586371 - 79587357

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTGCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TCCTCTGCCACA

Flanking Amino Acid:

NIVTSSGDTTCALWDIETGQ

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

73.5

0.53

0.8

67.7

32.4

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

41.3

-0.6

2.4

54.34

Associated Gene:

Gene:

GNB3

Ensembl Gene ID:

ENSAPLG00000003313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003388

79584802 - 79589215

4414