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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79596751_79598273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79596751 - 79598273

Intron Length:

1523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

ATTGCCACAATG

Flanking Amino Acid:

PRKKPTRLAIGVEGGFDITE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

85.6

0.8

0.6

81.9

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

48.2

-0.2

59.1

42.8

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018612

79596037 - 79607868

11832