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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79598408_79598740_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79598408 - 79598740

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTTGG

5'SS Class:

major

3'SS Sequence:

ACTCTAATTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ACTACTCTAATT

Flanking Amino Acid:

EGLPDMVRDRIASAVEAILT

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

60.8

46.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

70.1

0.45

0.9

63.6

36.4

Minor 5ss

38.1

-1.3

40.6

45.6

Minor BPS

55.5

0.25

1.7

71.56

39.8

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018612

79596037 - 79607868

11832

ENSAPLT00000003572

79596037 - 79607618

11582