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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79598887_79599199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79598887 - 79599199

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCGCA

5'SS Class:

major

3'SS Sequence:

TTCTTCTCAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTCTTCTCAACA

Flanking Amino Acid:

QLQNDVRIPPCGWKCSKCDM

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

63.8

36.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

80.9

0.69

0.8

77.5

29.8

Minor 5ss

31.3

-2.1

3.2

35.6

42.2

Minor BPS

71.3

0.66

1.5

79.1

37.4

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018612

79596037 - 79607868

11832

ENSAPLT00000003572

79596037 - 79607618

11582