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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79599385_79599951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79599385 - 79599951

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAAGA

5'SS Class:

major

3'SS Sequence:

TGTCCCTGCGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTCAG

U12 Branch Point Sequence:

TTTCCTTTTCCT

Flanking Amino Acid:

KLGTITPDGADVYSYDEDDM

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

0.9

69.5

36.5

Major BPS

44.4

-0.3

1.6

48.7

45.1

Major PPT

66.1

0.36

0.9

61.7

34.8

Minor 5ss

27.5

-2.6

2.7

28.4

Minor BPS

-0.3

3.6

81.46

40.1

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018612

79596037 - 79607868

11832

ENSAPLT00000003572

79596037 - 79607618

11582