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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79600594_79600755_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79600594 - 79600755

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAG

U12 Branch Point Sequence:

GCGTCCTTCAGG

Flanking Amino Acid:

VLFSIPDFQRKYVDKLEKIF

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

75.1

35.1

Major BPS

51.1

0.03

1.6

43.2

Major PPT

84.8

0.78

0.8

79.6

32.4

Minor 5ss

33.7

-1.9

3.2

40.4

Minor BPS

47.8

-0.3

2.1

51.35

48.8

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003572

79596037 - 79607618

11582

ENSAPLT00000018612

79596037 - 79607868

11832