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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79602188_79602358_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79602188 - 79602358

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCCAC

U12 Branch Point Sequence:

TCCTCTTCCACC

Flanking Amino Acid:

AEGEQQPDQKGVQNGIAPRM

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

55.1

0.13

1.3

67.8

38.2

Major PPT

89.2

0.88

0.7

84.7

30.1

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

49.3

-0

61.68

44.3

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018612

79596037 - 79607868

11832

ENSAPLT00000003572

79596037 - 79607618

11582