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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79602485_79602694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79602485 - 79602694

Intron Length:

210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGGCT

5'SS Class:

major

3'SS Sequence:

CTCCCTTGTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

ACCCTTTTAACC

Flanking Amino Acid:

FFLHFINMVERNCRSSENPN

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.4

37.1

Major BPS

89.7

0.98

0.7

89.9

Major PPT

77.3

0.61

0.9

75.7

32.8

Minor 5ss

31.9

-2.1

3.6

48.1

47.5

Minor BPS

60.6

0.31

1.3

61.09

38.7

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018612

79596037 - 79607868

11832

ENSAPLT00000003572

79596037 - 79607618

11582