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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79602849_79603242_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79602849 - 79603242

Intron Length:

394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTATTCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTTAT

U12 Branch Point Sequence:

TGGTCCTTGACT

Flanking Amino Acid:

PVPMDAALNKDELLEYEEKK

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.2

Major BPS

61.1

0.28

1.3

53.6

43.8

Major PPT

77.4

0.62

0.8

69.5

36.5

Minor 5ss

32.8

-2

2.7

42.5

44.3

Minor BPS

81.5

1.07

1.1

88.2

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003572

79596037 - 79607618

11582

ENSAPLT00000018612

79596037 - 79607868

11832