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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79604897_79605108_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79604897 - 79605108

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CCGTGTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTTAC

U12 Branch Point Sequence:

GTGGCCTTACGG

Flanking Amino Acid:

FGLDWVPKKLDVSIEMPEEL

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

0.9

68.2

42.8

Major BPS

51.2

0.03

1.2

45.3

39.5

Major PPT

75.5

0.57

0.9

68.6

37.3

Minor 5ss

-1.9

2.9

37.5

41.1

Minor BPS

46.6

-0.4

2.1

51.35

48.8

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018612

79596037 - 79607868

11832

ENSAPLT00000003572

79596037 - 79607618

11582