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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79605301_79605798_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79605301 - 79605798

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTTAGTGAT

5'SS Class:

major

3'SS Sequence:

TGTCTTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GTGTCTGTAACC

Flanking Amino Acid:

FCSPHFSSPTSPMLDESVII

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

75.5

33.8

Major BPS

62.2

0.3

1.2

38.7

Major PPT

78.6

0.64

0.8

72.8

32.1

Minor 5ss

33.1

-1.9

3.2

46.6

41.9

Minor BPS

59.1

0.26

70.61

41.1

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018612

79596037 - 79607868

11832

ENSAPLT00000003572

79596037 - 79607618

11582