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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79605943_79606095_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79605943 - 79606095

Intron Length:

153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCGCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

AGGCGTCTAACG

Flanking Amino Acid:

NWVMSHMDDPDFANPLVLPG

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

35.6

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

83.2

0.75

0.8

77.6

31.1

Minor 5ss

29.3

-2.4

3.5

40.3

46.1

Minor BPS

42.4

-0.7

44.61

41.3

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018612

79596037 - 79607868

11832

ENSAPLT00000003572

79596037 - 79607618

11582