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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79607191_79607340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79607191 - 79607340

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CTACCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCTAC

U12 Branch Point Sequence:

CGTCCCTGAGCT

Flanking Amino Acid:

HYVCHIKKDGRWVIYNDQKV

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

51.6

0.04

1.3

53.8

41.6

Major PPT

74.9

0.56

0.9

68.6

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

53.8

0.2

1.8

71.65

44.5

Associated Gene:

Gene:

USP5

Ensembl Gene ID:

ENSAPLG00000003443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018612

79596037 - 79607868

11832

ENSAPLT00000003572

79596037 - 79607618

11582