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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79609347_79609558_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79609347 - 79609558

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

GAAGCTGGATGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

ATTGCCTGCATT

Flanking Amino Acid:

RRHVFGESDEREAGITEKVV

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

69.4

35.7

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

40.4

-0.5

1.7

36.2

44.4

Minor 5ss

25.3

-2.8

3.2

32.7

42.3

Minor BPS

51.3

0.12

42.1

Associated Gene:

Gene:

TPI1

Ensembl Gene ID:

ENSAPLG00000004000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004110

79607911 - 79610490

2580