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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79610173_79610371_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79610173 - 79610371

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGGAG

5'SS Class:

major

3'SS Sequence:

GTTCCCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CATCTCTTAATC

Flanking Amino Acid:

VAQSTRIIYGGSVTGSNCKE

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

66.3

39.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

72.4

0.5

0.8

70.1

30.8

Minor 5ss

27.9

-2.5

3.5

36.8

47.7

Minor BPS

67.4

0.53

1.2

68.46

37.2

Associated Gene:

Gene:

TPI1

Ensembl Gene ID:

ENSAPLG00000004000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004110

79607911 - 79610490

2580