Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_79615584_79615680_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79615584 - 79615680

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATACAG

5'SS Class:

major

3'SS Sequence:

CCTCTGCACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTCCTCTGCACT

Flanking Amino Acid:

HPCLANLSLKGNKIRTALGL

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

60.5

39.9

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

68.2

0.41

0.9

65.2

35.2

Minor 5ss

25.9

-2.8

2.9

29.8

Minor BPS

50.5

0.1

1.9

73.74

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030042

79614227 - 79615952

1726

ENSAPLT00000004313

79614227 - 79619273

5047