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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79615849_79619262_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79615849 - 79619262

Intron Length:

3414

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCT|GCAAAGCCT

5'SS Class:

weak_major

3'SS Sequence:

AAGAGCTTGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAGAG

U12 Branch Point Sequence:

AAGAGCTTGACA

Flanking Amino Acid:

QPAWEMGVRCCQK*

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.4

0.01

1.5

58.6

40.1

Major BPS

-0

1.5

52.7

43.2

Major PPT

0.09

1.1

46.5

Minor 5ss

25.3

-2.8

4.3

49.2

46.6

Minor BPS

49.6

-0

1.8

58.22

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004313

79614227 - 79619273

5047