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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79619498_79619921_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79619498 - 79619921

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCTGGAGAC

5'SS Class:

weak_major

3'SS Sequence:

CTGCTCTGAAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAG

U12 Branch Point Sequence:

CTGCTCTGAAGA

Flanking Amino Acid:

LRWVLLASRWDLSTYIYLYR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.4

55.6

43.2

Major BPS

60.9

0.27

1.7

71.4

45.1

Major PPT

47.4

-0.1

1.7

53.7

40.4

Minor 5ss

14.9

-4.1

3.6

16.2

28.9

Minor BPS

-0.1

1.8

56.88

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047895

79619329 - 79620241

913