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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_79624025_79624865_F

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
79624025 - 79624865
Intron Length:
841

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTACGTGGG
5'SS Class:
strong_major
3'SS Sequence:
TGCCCTCCCTCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TGCTCAC
U12 Branch Point Sequence:
CTCTGCTCACGC
Flanking Amino Acid:
LLRWTCTHTKACFEQRSPAV
Intron Amino Acid Position:
23

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.6
0.79
1
67.3
44.3
Major BPS
69.8
0.49
1.1
71.3
36.7
Major PPT
72.4
0.5
0.8
69.3
31.3
Minor 5ss
31
-2.2
3.3
40.6
45.6
Minor BPS
39.9
-0.7
2.3
49.59
47.1

Associated Gene:

Gene:
ENO2
Ensembl Gene ID:
ENSAPLG00000019275
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000032753
79619974 - 79632080
12107