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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_79626709_79627520_F

Intron Information:

Intron Rank:
6
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
79626709 - 79627520
Intron Length:
812

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CCA|GTAAGACTC
5'SS Class:
major
3'SS Sequence:
TGGGCTCTTCCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTCTGAT
U12 Branch Point Sequence:
GTTGCTTCAGCT
Flanking Amino Acid:
GNSDLILPVPAFNVINGGSH
Intron Amino Acid Position:
123

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
71.4
0.5
1.1
64
40.8
Major BPS
79
0.72
1
69
38.9
Major PPT
72.2
0.5
1
62
44.4
Minor 5ss
38.7
-1.3
3.3
57.5
40.7
Minor BPS
50.8
0.1
1.9
72.89
44.1

Associated Gene:

Gene:
ENO2
Ensembl Gene ID:
ENSAPLG00000019275
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000032753
79619974 - 79632080
12107