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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_79627744_79628219_F

Intron Information:

Intron Rank:
7
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
79627744 - 79628219
Intron Length:
476

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTGAGAGCC
5'SS Class:
strong_major
3'SS Sequence:
CTCCTCCTTCCAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AATGCAA
U12 Branch Point Sequence:
CTCTCCCGAATG
Flanking Amino Acid:
FAPNILENSEALELLKEAID
Intron Amino Acid Position:
197

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.8
0.84
0.8
72.1
31.2
Major BPS
49.7
-0
1.3
61.4
36.2
Major PPT
81.4
0.71
0.7
72.6
32.1
Minor 5ss
26.3
-2.7
3.1
33.4
42
Minor BPS
49.1
-0.2
1.9
56.68
45

Associated Gene:

Gene:
ENO2
Ensembl Gene ID:
ENSAPLG00000019275
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000032753
79619974 - 79632080
12107