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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79654201_79655027_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79654201 - 79655027

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

GACCGCCTAACT

Flanking Amino Acid:

SNAPKKTKTEELPCPPSPSD

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

83.2

0.75

0.8

80.9

31.2

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

47.1

-0.1

2.1

64.45

45.1

Associated Gene:

Gene:

ATN1

Ensembl Gene ID:

ENSAPLG00000021772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020777

79653197 - 79660816

7620