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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79659248_79659782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79659248 - 79659782

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTATCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTCTCATAATC

Flanking Amino Acid:

VPLPTQEDYYSHLKKESDKP

Intron Amino Acid Position:

1202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

72.1

33.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

73.3

0.53

0.9

66.2

39.5

Minor 5ss

26.5

-2.7

3.2

33.9

42.2

Minor BPS

58.4

0.24

1.6

68.2

37.5

Associated Gene:

Gene:

ATN1

Ensembl Gene ID:

ENSAPLG00000021772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020777

79653197 - 79660816

7620