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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79675166_79675347_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79675166 - 79675347

Intron Length:

182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TGCCCCTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAACAT

U12 Branch Point Sequence:

ATGTGCAAAGCT

Flanking Amino Acid:

DMIVEAISTKGLDCDIDIQK

Intron Amino Acid Position:

488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.1

40.1

Major BPS

50.9

0.02

1.1

36.1

Major PPT

0.32

57.7

38.5

Minor 5ss

29.4

-2.4

3.3

Minor BPS

41.2

-0.5

2.3

63.05

46.8

Associated Gene:

Gene:

PTPN6

Ensembl Gene ID:

ENSAPLG00000004866

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005098

79668785 - 79676085

7301