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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79689083_79689458_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79689083 - 79689458

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTTTCCTCATCT

Flanking Amino Acid:

YKYVTCWLVTEGVCILVGLG

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

70.6

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

0.92

0.6

88.3

21.5

Minor 5ss

28.6

-2.5

2.8

32.9

41.9

Minor BPS

72.1

0.77

1.8

92.57

36.2

Associated Gene:

Gene:

LPCAT3

Ensembl Gene ID:

ENSAPLG00000005313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033780

79687286 - 79699963

12678

ENSAPLT00000005500

79687286 - 79700074

12789