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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79690524_79690930_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79690524 - 79690930

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATGAGA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTATTTGACC

Flanking Amino Acid:

MTDVQGQRPNSFVPALKRLS

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.5

39.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

92.3

0.95

0.6

92.1

18.5

Minor 5ss

31.7

-2.1

3.1

40.5

45.2

Minor BPS

72.7

0.7

1.4

82.71

30.5

Associated Gene:

Gene:

LPCAT3

Ensembl Gene ID:

ENSAPLG00000005313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033780

79687286 - 79699963

12678

ENSAPLT00000005500

79687286 - 79700074

12789