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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79691110_79692138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79691110 - 79692138

Intron Length:

1029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CACTTTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ATGATGTTAATG

Flanking Amino Acid:

IDYYDGGKDLEFLTPEQRRF

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

84.4

0.85

34.5

Major PPT

69.9

0.45

64.5

41.1

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

47.5

-0.3

2.1

53.58

Associated Gene:

Gene:

LPCAT3

Ensembl Gene ID:

ENSAPLG00000005313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033780

79687286 - 79699963

12678

ENSAPLT00000005500

79687286 - 79700074

12789