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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79720634_79721096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79720634 - 79721096

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTTTATTT

Flanking Amino Acid:

TWHQSMPRCEIVKCDNPTEL

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.2

34.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

28.3

-2.5

3.1

31.3

36.6

Minor BPS

63.5

0.5

1.6

78.46

Associated Gene:

Gene:

C1R

Ensembl Gene ID:

ENSAPLG00000006077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006378

79717793 - 79725034

7242