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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79723115_79723284_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79723115 - 79723284

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTATCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CATCTCTTATCT

Flanking Amino Acid:

RGFLAYYQAVDLDECDPNNA

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.8

43.8

Major BPS

79.1

0.72

69.3

38.4

Major PPT

0.77

0.8

81.3

30.6

Minor 5ss

29.2

-2.4

2.5

25.2

36.6

Minor BPS

60.2

0.4

1.6

74.17

42.5

Associated Gene:

Gene:

C1R

Ensembl Gene ID:

ENSAPLG00000006077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006378

79717793 - 79725034

7242