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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79727838_79728117_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79727838 - 79728117

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGAGG

5'SS Class:

major

3'SS Sequence:

CATGACGGCCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCGCAT

U12 Branch Point Sequence:

CAGCGCATGACG

Flanking Amino Acid:

HWLEGDRLHLDEVCVQVFQK

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

62.2

43.8

Major BPS

48.4

-0.1

1.4

57.1

41.8

Major PPT

42.6

-0.4

1.7

34.7

40.5

Minor 5ss

26.4

-2.7

2.9

27.5

37.7

Minor BPS

41.5

-0.8

41.74

42.9

Associated Gene:

Gene:

RBP5

Ensembl Gene ID:

ENSAPLG00000007239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007521

79727799 - 79729263

1465