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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79731096_79732053_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79731096 - 79732053

Intron Length:

958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTGGGTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

TTCCTCTCCACC

Flanking Amino Acid:

LDKDAPLRYAGEICGFRIHG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

58.1

0.18

1.2

49.5

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

48.5

-0.1

63.43

42.2

Associated Gene:

Gene:

CLSTN3

Ensembl Gene ID:

ENSAPLG00000007312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044390

79728960 - 79743282

14323

ENSAPLT00000023453

79730191 - 79743282

13092

ENSAPLT00000007632

79719917 - 79743282

23366