Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_79757175_79757477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79757175 - 79757477

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

CTGTTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCAAAG

U12 Branch Point Sequence:

GTTGGGGTAATT

Flanking Amino Acid:

WPHGAPGAAAVSKPLGVASE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

39.4

Major BPS

47.8

-0.1

1.4

Major PPT

0.65

0.8

70.1

36.5

Minor 5ss

30.5

-2.2

3.2

44.4

43.5

Minor BPS

39.5

-0.7

2.8

63.65

47.2

Associated Gene:

Gene:

PEX5

Ensembl Gene ID:

ENSAPLG00000007988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038026

79756984 - 79767662

10679

ENSAPLT00000008339

79756984 - 79767662

10679