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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79761501_79761887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79761501 - 79761887

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCAAACTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TGTTTCCAAACT

Flanking Amino Acid:

QWAAEFMQQQGASDAWVDQF

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

72.7

0.57

72.1

31.1

Major PPT

64.9

0.34

0.9

54.3

40.1

Minor 5ss

30.3

-2.3

3.5

Minor BPS

57.4

0.31

81.08

40.4

Associated Gene:

Gene:

PEX5

Ensembl Gene ID:

ENSAPLG00000007988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028103

79756984 - 79767662

10679

ENSAPLT00000008339

79756984 - 79767662

10679