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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79897652_79902647_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79897652 - 79902647

Intron Length:

4996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TTATGTTGAATT

Flanking Amino Acid:

GFEEVDGSCVACQRGFYRHS

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.9

30.1

Major BPS

82.6

0.81

0.8

71.7

Major PPT

78.5

0.64

0.9

72.3

37.9

Minor 5ss

33.9

-1.8

2.8

41.5

45.1

Minor BPS

57.2

0.3

1.9

77.41

39.4

Associated Gene:

Gene:

EPHA1

Ensembl Gene ID:

ENSAPLG00000002800

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002909

79880992 - 79914445

33454