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Intron Name: Anas_platyrhynchos_platyrhynchos_1_79996326_79998017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79996326 - 79998017

Intron Length:

1692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATCC

Flanking Amino Acid:

HEILEPQQPPGNFWNLRQLI

Intron Amino Acid Position:

775

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

73.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.2

0.86

0.7

85.9

28.3

Minor 5ss

42.1

-0.9

3.1

54.8

49.4

Minor BPS

64.6

0.44

1.6

73.19

38.5

Associated Gene:

Gene:

CLCN1

Ensembl Gene ID:

ENSAPLG00000004009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045237

79990342 - 80053707

63366

ENSAPLT00000044841

79990342 - 80053581

63240

ENSAPLT00000004156

79990342 - 80032871

42530

ENSAPLT00000046486

79990342 - 80032777

42436