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Intron Name: Anas_platyrhynchos_platyrhynchos_1_80000250_80001893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80000250 - 80001893

Intron Length:

1644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGATATTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AATTCCATAATT

Flanking Amino Acid:

CGGFMPVFVLGAAFGRLIGE

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.8

38.1

Major BPS

84.4

0.85

34.5

Major PPT

78.6

0.64

69.6

45.4

Minor 5ss

37.9

-1.4

2.9

40.9

45.3

Minor BPS

71.6

0.76

1.5

85.05

34.7

Associated Gene:

Gene:

CLCN1

Ensembl Gene ID:

ENSAPLG00000004009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045237

79990342 - 80053707

63366

ENSAPLT00000044841

79990342 - 80053581

63240

ENSAPLT00000004156

79990342 - 80032871

42530

ENSAPLT00000046486

79990342 - 80032777

42436