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Intron Name: Anas_platyrhynchos_platyrhynchos_1_80060885_80061488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80060885 - 80061488

Intron Length:

604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATGT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

DTHVADMLVKVNRQIKQREG

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.6

33.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.1

0.68

0.8

78.2

34.6

Minor 5ss

34.2

-1.8

3.2

47.6

47.9

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

CASP2

Ensembl Gene ID:

ENSAPLG00000004839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005035

80060387 - 80076681

16295